This function organizes higher-level information for creating haplotypes from Variant Call Format (VCF) files.
haps_vcf(fn, print_names = FALSE)A single string specifying the name of the VCF file
Logical for whether to print all unique chromosome names from
the VCF file when VCF chromosome names don't match those from the reference genome.
This printing doesn't happen until this object is passed to create_haplotypes.
This can be useful for troubleshooting.
Defaults to FALSE.
A haps_vcf_info object containing information used in create_haplotypes
to create variant haplotypes.
This class is just a wrapper around a list containing the arguments to this
function, which you can view (but not change) using the object's fn() and
print_names() methods.